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Recent publications by students

Alexander J, Lim D, Joughin B, Fry A, Nigg E, Mussachio A, Peters JM, Smerdon SJ, Yaffe MB. Optimal Phosphorylation Motifs for Major Mitotic Kinases: A Comparative Analysis". In preparation.
Mazanka E, Alexander J, Yeh BJ, Charoenpong P, Lowery DM, Yaffe MB, Weiss EL. The NDR/LATS Family Kinase Cbk1 Directly Controls Transcriptional Asymmetry. PLoS Biol. 2008. 6:1778-1790.
Miller ML, Jensen LJ, Diella F, Jorgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, PawsonT, Turk BE, Yaffe MB, Brunak S, Linding R. Linear motif atlas for phosphorylation-dependent signaling. Sci. Signal. 2008. 1: ra2
Lowery DM, Clauser KR, Hjerrild M, Lim D, Alexander J, Kishi K, Ong SE, Gammeltoft S, Carr SA, Yaffe MB. Proteomic screen defines the Polo-box domain interactome and identifies Rock2 as a Plk1 substrate. EMBO J. 2007. 26:2262-73.

Anderson RB, Cianciolo GJ, Kennedy MN and Pizzo SV. {alpha}2-Macroglobulin binds CpG oligodeoxynucleotides and enhances their immunostimulatory properties by a receptor-dependent mechanism. J Leukoc Biol 83: 381-392, 2008.

Angelo M, Hausladen A, Singel DJ and Stamler JS. Interactions of NO with Hemoglobin: From Microbes to Man. Methods Enzymol 436C: 131-168, 2008.
Hausladen A, Rafikov R, Angelo M, Singel DJ, Nudler E and Stamler JS. Assessment of nitric oxide signals by triiodide chemiluminescence. Proc Natl Acad Sci U S A 104: 2157-2162, 2007.
Reynolds JD, Ahearn GS, Angelo M, Zhang J, Cobb F and Stamler JS. S-nitrosohemoglobin deficiency: a mechanism for loss of physiological activity in banked blood. Proc Natl Acad Sci U S A 104: 17058-17062, 2007.
Angelo M, Singel DJ and Stamler JS. An S-nitrosothiol (SNO) synthase function of hemoglobin that utilizes nitrite as a substrate. Proc Natl Acad Sci U S A 103: 8366-8371, 2006.

Bowers EV, Horvath JJ, Bond JE, Cianciolo GJ, Pizzo, SV. Encapsulation into ?2-Macroglobulin Enhances the Cell-Mediated Immune Response to Antigen. 10th Annual Conference on Vaccine Research. Baltimore, MD, May 2007.

Schmidt C, Lepsverdize E, Chi SL, Das AM, Pizzo SV, Dityatev A and Schachner M. Amyloid precursor protein and amyloid beta-peptide bind to ATP synthase and regulate its activity at the surface of neural cells. Mol Psychiatry, 2007.
Chi SL, Wahl ML, Mowery YM, Shan S, Mukhophadyay S, Hilderbrand SC, Kenan DJ, Lipes BD, Johnson CE, Marusich MF, Capaldi RA, Dewhirst MW, and Pizzo SV. Angiostatin-Re activity of a monoclonal antibody to the catalytic subunit of FIF,, ATP synthase. Cancer Res. 2007 May IS; 67(10)4716-24.
Chi SL, and Pizzo SV. Cell surface FIF,, ATP synthase: A new paradigm? Ann Med. 2006; 38(6):429-38.
Chi SL, and Pizzo SV. Angiostatin is directly cytotoxic to tumor cells at low extracellular pH: a mechanism dependent on cell surface-associated ATP synthase. Cancer Res 2006 Jan 15; 66(2):875-82.

Crozier JC, Dodge KA, Fontaine RG, Lansford JE, Bates JE, Pettit GS and Levenson RW. Social information processing and cardiac predictors of adolescent antisocial behavior. J Abnorm Psychol 117: 253-267, 2008.
Lansford JE, Malone PS, Dodge KA, Crozier JC, Pettit GS and Bates JE. A 12-year prospective study of patterns of social information processing problems and externalizing behaviors. J Abnorm Child Psychol 34: 715-724, 2006.
Lansford JE, Dodge KA, Pettit GS, Bates JE, Crozier J and Kaplow J. A 12-year prospective study of the long-term effects of early child physical maltreatment on psychological, behavioral, and academic problems in adolescence. Arch Pediatr Adolesc Med 156: 824-830, 2002.

DeCamp M. Scrutinizing Global Short-term Medical Outreach. Hastings Center Report 37: 21-23, 2007.
DeCamp, M., editor. (2004) Standards of care: The joy of doctoring. Virtual Mentor: Ethics Jornal of the American Medical Association 6(12).
DeCamp, M and Sugarman, J. (2004) Ethics and research assessing the relative roles of genes and the environment. Accountability in Research 11(3/4):161-82.
DeCamp, M and Sugarman, J. (2004) Ethics and research assessing the relative roles of genes and the environment. Accountability in Research 11(3/4):161-82.
DeCamp, M and Sugarman, J. (2004) Ethics in behavioral genetics research. Accountability in Research 11(1):27-47.
DeCamp, M (2002) Ethics and the physician-patient relationship: medico-moral consequences of commodification. Einstein Quarterly Journal of Biology and Medicine 19(3):135-8.

Eyler CE, Foo WC, Lafiura KM, McLendon RE, Hjelmeland AB and Rich JN. Brain Cancer Stem Cells Display Preferential Sensitivity to Akt Inhibition. Stem Cells, 2008.
Eyler CE and Rich JN. Survival of the fittest: cancer stem cells in therapeutic resistance and angiogenesis. J Clin Oncol 26: 2839-2845, 2008.

Fecci PE, Ochiai H, Grossi PM, Sweeney AE, Archer GE, Chewning TA, Mitchell DA, Dranoff G, Allison JP, Bigner DD, and Sampson JH. Systemic blockade of CTLA-4 ameliorates glioma-induced changes to the CD4 T-cell compartment without affecting regulatory T-cell function. Clin Cancer Res 2007; 13(7): 2158-67.
Learn CL, Fecci PE Schmittling RJ, , Xie W, Karikari I, Mitchell DA, Archer GE, Wei Z, Dressman H, Sampson JH. Expression profiling of CD4+, CD8+ and CD4+CD25+CD45RO+FoxP3+ T cells in patients with malignant glioma reveals immunosuppression of the transcriptome. Clin Cancer Res: 2006; 12(24): 7306-15.
Fecci PE, Sweeney AE, Grossi PM, Nair S, Learn CA, Mitchell DA, Cui X, Cummings TM, Bigner DD, and Sampson JH. Systemic anti-CD25 monoclonal antibody administration safely enhances immunity in murine glioma without eliminating regulatory T-cells. Clin Cancer Res 2006; 12(14):4294-305.
Fecci PE, Mitchell DA, Whitesides JF, Xie W, Friedman AH, Archer GE, Herndon JE II, Bigner DD, Dranoff G, and Sampson JH. Increased regulatory T-cell fraction amidst a diminished CD4 compartment explains cellular immune defects in patients with malignant glioma. Cancer Res. 2006; 66(6) 3294-302.
Fecci PE. The role of regulatory T-cells as barriers to cellular and anti-tumor immunity in patients with malignant brain tumors. Duke University Medical Center Library 2006.
Mitchell DA, Fecci PE, Sampson JH. “Adoptive immunotherapy for treatment of glioblastoma” in Glioblastoma Multiforme., Markert, J., DeVita, V.T., Rosenberg, S.A., Editors. 2005, Jones and Bartlett Publishers: Sudbury, Mass. Chapter 13.
Fecci PE, Sweeney AE, Mitchell DA, Bigner DD, and Sampson JH. Anti-GITR counters regulatory T-cell function and eliminates well-established malignant glioma. Manuscript in preparation.
Unger JM, Fecci PE, Sweeney AE, Mitchell DA, Sampson JH. Synergism of radiotherapy and regulatory T-cell depletion in the treatment of malignant glioma. Manuscript in preparation.
Mitchell DA, Fecci PE, Sampson JH. Adoptive immunotherapy for malignant glioma. Cancer J 2003; 9(3):157-66.
Fecci PE, Mitchell DA, Archer GE, Morse MA, Lyerly HK, Bigner DD, Sampson JH. The history, evolution, and clinical use of dendritic cell-based immunization strategies for the therapy of brain tumors. J Neurooncol 2003; 64(1-2):161-76.
Fecci PE, Sampson JH. Clinical immunotherapy for brain tumors. Neuroimaging Clin N Am 2002; 12(4):641-64.
Fecci PE, Gromeier M, Sampson JH. Viruses in the treatment of brain tumors. Neuroimaging Clin N Am 2002; 12(4):553-70.
Moon PF, Ramsay MM, Fecci PE, Nathanielsz PW. Fetal exposure to magnesium chloride-adenosine triphosphate (MgCl2-ATP) results in alterations in cerebral blood flow and a metabolic acidosis. Pediatr Crit Care Med 2001; 2(1):74-81.
Selznick LA, Fecci PE, Sampson JH. Molecular strategies for the treatment of malignant glioma. Manuscript in preparation.

Ferguson EC and Rathmell JC. New roles for pyruvate kinase M2: working out the Warburg effect. Trends Biochem Sci 33: 359-362, 2008.

Chaibub Neto E, Ferrara CT, Attie AD, Yandell BS. Inferring Causal Phenotype Networks from Segregating Populations. Genetics 179:1008-111, 2008.
Ferrara CT, Wang P, Neto EC, Stevens RD, Bain JR, Wenner BR, Ilkayeva OR, Keller MP, Blasiole DA, Kendziorski C, Yandell BS, Newgard CB and Attie AD. Genetic networks of liver metabolism revealed by integration of metabolic and transcriptional profiling. PLoS Genet 4: e1000034, 2008.

Ficklin MB, Zhao S and Feng G. Ubiquilin-1 regulates nicotine-induced up-regulation of neuronal nicotinic acetylcholine receptors. J Biol Chem 280: 34088-34095, 2005.

Xie D, Findley CM, Timberlake SH, Reed EA, Pippen AM, Kontos CD, Donatucci CF and Annex BA. VEGF Mediates the Beneficial Effects of bFGF on Vasoreactivity in Corporal tissues of Hypercholesterolemic Rabbits. Journal of Sexual Medicine. 5(9):2069-78, 2008.
Findley CM, Mitchell RG, Duscha BD, Annex BH and Kontos CD. Plasma levels of soluble Tie2 and vascular endothelial growth factor distinguish critical limb ischemia from intermittent claudication in patients with peripheral arterial disease. J Am Coll Cardiol 52: 387-393, 2008.
Findley CM
, Cudmore MJ, Ahmed A and Kontos CD. VEGF induces Tie2 shedding via a phosphoinositide 3-kinase/Akt dependent pathway to modulate Tie2 signaling. Arterioscler Thromb Vasc Biol 27: 2619-2626, 2007.

Forrester MT, Foster MW, Benhar M and Stamler JS. Detection of protein S-nitrosylation with the biotin-switch technique. Free Radic Biol Med 46: 119-126, 2009.
Forrester MT
, Foster MW and Stamler JS. Assessment and application of the biotin switch technique for examining protein S-nitrosylation under conditions of pharmacologically induced oxidative stress. J Biol Chem 282: 13977-13983, 2007.
Forrester MT and Stamler JS. A classification scheme for redox-based modifications of proteins. Am J Respir Cell Mol Biol 36: 135-137, 2007.
Benhar M, Forrester MT and Stamler JS. Nitrosative stress in the ER: a new role for S-nitrosylation in neurodegenerative diseases. ACS Chem Biol 1: 355-358, 2006.

Hall AHS, Wan J, Spesock A, Segueeva Z, Ramsay Shaw B, Alexander K A. High potency silencing by single-stranded boranophosphate siRNA, Nucleic Acids Research, Volume: 34, Pages: 2773-81, 5/2006
Hall AHS, Wan J, Shaughnessy EE, Ramsay Shaw B, Alexande, KA. RNA interference using boranophosphate siRNAs: structure-activity relationships. Nucleic Acids Research, Volume: 32, Pages: 5991-6000, 11/2004

John P. Kirkpatrick, Jing Mi, Stacey A. Snyder, Zahid N. Rabbani, Shiva Sarraf-Yazdi, Matthew E. Hardee, Brian S. Sorg, Zeljko Vujaskovic, Bryan M. Clary, Kimberly L. Blackwell, and Mark W. Dewhirst. Assessing the Growth, Oxygenation and Radioresponsiveness of a Murine Colon Adenocarcinoma using in vivo Bioluminescent Imaging. Radiation Research (In Review)
J. P. Kirkpatrick, Z. N. Rabbani, R. Bentley, M. E. Hardee, S. Karol, J. A. Meyer, E. Oosterwijk, L. A. Havrilesky, A. A. Secord, Z. Vujaskovic, M. W. Dewhirst, and E. L. Jones. “Elevated CAIX Expression is Associated with an Increased Risk of Distant Failure in Early-Stage Cervical Cancer.” JCO (In Review)
Matthew E. Hardee, Rose J. Eapen, Matthew R. Dreher, , Zahid N. Rabbani, Jeffery Marks, Kimberly L. Blackwell, Mark W. Dewhirst. “Her2/neu signaling blockade improves tumor oxygenation in a multifactorial fashion in Her2/neu+ tumors” JNCI (In Review).
Hardee ME, Cao Y, Fu P, Jiang X, Zhao Y, Rabbani ZN, Vujaskovic Z, Dewhirst MW and Arcasoy MO. Erythropoietin blockade inhibits the induction of tumor angiogenesis and progression. PLoS ONE 2: e549, 2007.
Matthew E. Hardee, Murat O. Arcasoy, John P. Kirkpatrick, Kimberly L. Blackwell, Mark W. Dewhirst. Erythropoietin Biology in Cancer. Clinical Cancer Research 2006. 12(2): 332-39.
John P. Kirkpatrick, Matthew E. Hardee, Stacey A. Snyder, Catherine M. Peltz, Yulin Zhao, David M. Brizel, Mark W. Dewhirst, and Kimberly L. Blackwell. The Effect of Darbepoetin Alfa on Growth, Oxygenation and Radioresponsiveness of a Breast Adenocarcinoma. Radiation Research 2006. 165: 192-201.
Matthew E. Hardee, Zahid N. Rabbani, Murat O. Arcasoy, John P. Kirkpatrick, Zeljko Vujaskovic, Mark W. Dewhirst, Kimberly L. Blackwell. Erythropoietin inhibits apoptosis in breast cancer cells in vivo via an Akt-dependent pathway. Molecular Cancer Therapeutics 2006. 5(2): 356-61.
Matthew E. Hardee, John P. Kirkpatrick, Siqing Shan, Stacey A. Snyder, Zeljko Vujaskovic, Zahid N. Rabbani, Mark W. Dewhirst, and Kimberly L. Blackwell. Human recombinant erythropoietin (rEpo) has no effect on tumor growth or angiogenesis. British Journal of Cancer 2005. 93 (12): 1350-1355.

Bennett V and Healy J. Being there: cellular targeting of voltage-gated sodium channels in the heart. J Cell Biol 180: 13-15, 2008.
Bennett V and Healy J. Organizing the fluid membrane bilayer: diseases linked to spectrin and ankyrin. Trends Mol Med 14: 28-36, 2008.
Mohler PJ, Healy JA, Xue H, Puca AA, Kline CF, Rand Allingham R, Kranias EG, Rockman HA and Bennett V. Ankyrin-B syndrome: enhanced cardiac function balanced by risk of cardiac death and premature senescence. PLoS ONE 2: e1051, 2007.

Hwang RY, Zhong L, Xu Y, Johnson T, Zhang F, Deisseroth K and Tracey WD. Nociceptive neurons protect Drosophila larvae from parasitoid wasps. Curr Biol 17: 2105-2116, 2007.

Johnson CE and Kornbluth S. Caspase cleavage is not for everyone. Cell 134: 720-721, 2008.
Johnson CE, Huang YY, Parrish AB, Smith MI, Vaughn AE, Zhang Q, Wright KM, Van Dyke T, Wechsler-Reya RJ, Kornbluth S and Deshmukh M. Differential Apaf-1 levels allow cytochrome c to induce apoptosis in brain tumors but not in normal neural tissues. Proc Natl Acad Sci U S A 104: 20820-20825, 2007.
Chi SL, Wahl ML, Mowery YM, Shan S, Mukhopadhyay S, Hilderbrand SC, Kenan DJ, Lipes BD, Johnson CE, Marusich MF, Capaldi RA, Dewhirst MW and Pizzo SV. Angiostatin-like activity of a monoclonal antibody to the catalytic subunit of F1F0 ATP synthase. Cancer Res 67: 4716-4724, 2007.

Kawamoto K, Lobach DF. Clinical Decision Support in Genomic and Personalized Medicine [book chapter] [in press]. In: Willard HF and Ginsburg GS, ed. Handbook of Genomic Medicine. Elsevier, Inc.
Kawamoto K, Allen LaPointe NM, Silvey GM, Anstrom KJ, Eisenstein EL, Lobach DF. Development and evaluation of an improved methodology for assessing adherence to evidence-based drug therapy guidelines using claims data. Proceedings / AMIA Annual Symposium. 2007;394-8.
Lobach DF, Kawamoto K, Anstrom KJ, Kooy KR, Eisenstein EL, Silvey GM, Willis JM, Johnson F, Simo J. Proactive population health management in the context of a regional health information exchange using standards-based decision support. Proceedings / AMIA Annual Symposium. 2007;473-7.
Eisenstein EL, Lobach DF, Montgomery P, Kawamoto K, Anstrom KJ. Evaluating implementation fidelity in health information technology interventions. Proceedings / AMIA Annual Symposium. 2007;211-5.
Lobach DF, Kawamoto K, Anstrom KJ, Russel ML, Woods P, Smith D. Development, deployment and usability of a point-of-care decision support system for chronic disease management using the recently-approved HL7 Decision Support Service standard. Medinfo. 2007;861-5.
Kawamoto K, Lobach DF. Proposal for fulfilling strategic objectives of the U.S. roadmap for national action on decision support through a service-oriented architecture leveraging HL7 services. Journal of the American Medical Informatics Association. 2007;14:146-155.
Kawamoto K. Integration of knowledge resources into applications to enable clinical decision support: architectural considerations [book chapter]. In Greenes RA, ed. Clinical Decision Support: the Road Ahead. Elsevier, Inc. 2006.
Drew RH, Kawamoto K, Adams M. Information technology for optimizing the management of infectious diseases. American Journal of Health- System Pharmacy. 2006;63:957-65.
Ferranti JM, Musser RC, Kawamoto K, Hammond WE. The Clinical Document Architecture and the Continuity of Care Record: a critical analysis. Journal of the American Medical Informatics Association. 2006;13:245-252.
Kawamoto K, Lobach DF. Design, implementation, use, and preliminary evaluation of SEBASTIAN, a standards-based Web service for clinical decision support. Proceedings / AMIA Annual Symposium. 2005;380-4.
Eisenstein EE, Anstrom KJ, Arbanas JM, Crosslin DR, Johnson FS, Kawamoto K, Lobach DF. Assessing the potential economic value of health information technology interventions. Proceedings / AMIA Annual Symposium. 2005: 221-225.
Kawamoto K, Houlihan CA, Balas EA, Lobach DF. Improving clinical practice using clinical decision support systems: a systematic review of trials to identify features critical to success. British Medical Journal. 2005;330:765-72.
Kawamoto K, Lobach DF. Clinical decision support provided within physician order entry systems: a systematic review of features effective for changing clinician behavior. Proceedings / AMIA Annual Symposium. 2003;361-5.

Wang D*, Kelly BB*, Albrecht DE, Adams ME, Froehner SC and Feng G. Complete deletion of all alpha-dystrobrevin isoforms does not reveal new neuromuscular junction phenotype. Gene Expr 14: 47-57, 2007. *Co-first authors
Kelly, BB, Hedlund, E., Kim, C., lshiguro, H., lsacson, O., Chikaraishi, D.M., Kim, K.S., & Feng, G. (2006). A tyrosine hydroxylase-yellow fluorescent protein knock-in reporter system labeling dopaminergic neurons reveals potential regulatory role for the first intron of the rodent tyrosine hydroxylase gene. Neuroscience, 142(2):343-54.

Kelly P, Casey PJ and Meigs TE. Biologic functions of the G12 subfamily of heterotrimeric g proteins: growth, migration, and metastasis. Biochemistry 46: 6677-6687, 2007.
Dong M, How T, Kirkbride KC, Gordon KJ, Lee JD, Hempel N, Kelly P, Moeller BJ, Marks JR and Blobe GC. The type III TGF-beta receptor suppresses breast cancer progression. J Clin Invest 117: 206-217, 2007.
Kelly P, Moeller BJ, Juneja J, Booden MA, Der CJ, Daaka Y, Dewhirst MW, Fields TA and Casey PJ. The G12 family of heterotrimeric G proteins promotes breast cancer invasion and metastasis. Proc Natl Acad Sci U S A 103: 8173-8178, 2006.
Kelly P, Stemmle LN, Madden JF, Fields TA, Daaka Y and Casey PJ. A role for the G12 family of heterotrimeric G proteins in prostate cancer invasion. J Biol Chem 281: 26483-26490, 2006.
Peterson YK, Kelly P, Weinbaum CA and Casey PJ. A novel protein geranylgeranyltransferase-I inhibitor with high potency, selectivity, and cellular activity. J Biol Chem 281: 12445-12450, 2006.
Kasbohm EA, Guo R, Yowell CW, Bagchi G, Kelly P, Arora P, Casey PJ and Daaka Y. Androgen receptor activation by G(s) signaling in prostate cancer cells. J Biol Chem 280: 11583-11589, 2005.
Kimple ME, Nixon AB, Kelly P, Bailey CL, Young KH, Fields TA and Casey PJ. A role for G(z) in pancreatic islet beta-cell biology. J Biol Chem 280: 31708-31713, 2005.
Pagliarini DJ, Wiley SE, Kimple ME, Dixon JR, Kelly P, Worby CA, Casey PJ and Dixon JE. Involvement of a mitochondrial phosphatase in the regulation of ATP production and insulin secretion in pancreatic beta cells. Mol Cell 19: 197-207, 2005.
Wittchen ES, Worthylake RA, Kelly P, Casey PJ, Quilliam LA and Burridge K. Rap1 GTPase inhibits leukocyte transmigration by promoting endothelial barrier function. J Biol Chem 280: 11675-11682, 2005.
Kaplan DD, Meigs TE, Kelly P and Casey PJ. Identification of a role for beta-catenin in the establishment of a bipolar mitotic spindle. J Biol Chem 279: 10829-10832, 2004.

He XP, Kotloski R, Nef S, Luikart BW, Parada LF and McNamara JO. Conditional deletion of TrkB but not BDNF prevents epileptogenesis in the kindling model. Neuron 43: 31-42, 2004.

Pyhtila B, Zheng T, Lager PJ, Keene JD, Reedy MC and Nicchitta CV. Signal sequence- and translation-independent mRNA localization to the endoplasmic reticulum. Rna, 2008.
Keene JD and Lager PJ. Post-transcriptional operons and regulons co-ordinating gene expression. Chromosome Res 13: 327-337, 2005.
Stephens SB, Dodd RD, Brewer JW, Lager PJ, Keene JD and Nicchitta CV. Stable ribosome binding to the endoplasmic reticulum enables compartment-specific regulation of mRNA translation. Mol Biol Cell 16: 5819-5831, 2005.
Lerner RS, Seiser RM, Zheng T, Lager PJ, Reedy MC, Keene JD and Nicchitta CV. Partitioning and translation of mRNAs encoding soluble proteins on membrane-bound ribosomes. Rna 9: 1123-1137, 2003.
Tenenbaum SA, Lager PJ, Carson CC and Keene JD. Ribonomics: identifying mRNA subsets in mRNP complexes using antibodies to RNA-binding proteins and genomic arrays. Methods 26: 191-198, 2002.
Tenenbaum SA, Carson CC, Lager PJ and Keene JD. Identifying mRNA subsets in messenger ribonucleoprotein complexes by using cDNA arrays. Proc Natl Acad Sci U S A 97: 14085-14090, 2000.

Schloesser R, Lan M, Manji H “Neurodegeneration in Psychiatric Illness” in The New Encyclopedia of Neuroscience 2007 in press
Lan MJ, McLoughlin GA, Griffin JL, Tsang TM, Huang JT, Yuan P, Manji H, Holmes E and Bahn S. Metabonomic analysis identifies molecular changes associated with the pathophysiology and drug treatment of bipolar disorder. Mol Psychiatry, 2008.
Lan MJ, Yuan P, Chen G and Manji HK. Neuronal peroxisome proliferator-activated receptor gamma signaling: regulation by mood-stabilizer valproate. J Mol Neurosci 35: 225-234, 2008.
Yuan P, Gould TD, Gray NA, Bachmann RF, Schloesser RJ, Lan M, Du J, Moore GJ, Manji HK “Neurotrophic Signaling Cascades are Major Long-term Targets for Lithium: Clinical Implications” Clinical Neuroscience Research 2004 4 (3-4): 137-153.

Lillis, A. P., Mikhailenko, I., Migliorini, M., Robinson, S. L., Lee, M. J., Battey, F., Pizzo, S. V., Fried, S. K., Strickland, D. K. Macrophage low-density lipoprotein receptor-related protein deficiency leads to triglyceride-rich lipoprotein accumulation in LDLR knockout mice. In preparation.
Lillis AP
, Greenlee MC, Mikhailenko I, Pizzo SV, Tenner AJ, Strickland DK and Bohlson SS. Murine low-density lipoprotein receptor-related protein 1 (LRP) is required for phagocytosis of targets bearing LRP ligands but is not required for C1q-triggered enhancement of phagocytosis. J Immunol 181: 364-373, 2008.
Lillis AP, Van Duyn LB, Murphy-Ullrich JE and Strickland DK. LDL receptor-related protein 1: unique tissue-specific functions revealed by selective gene knockout studies. Physiol Rev 88: 887-918, 2008.
Lillis AP, Mikhailenko I, Strickland DK, Beyond endocytosis: LRP function in cell migration, proliferation and vascular permeability. J Thromb Haemost. 2005 Aug;3(8):1884-93.

Long A and Platt M. Decision making: the virtue of patience in primates. Curr Biol 15: R874-876, 2005.

McCoy AN. Platt ML. (2005) Risk-sensitive neurons in macaque posterior cingulate cortex.Nature Neuroscience. 8(9):1220-7, 2005 Sep.
McCoy AN. Platt ML. (2005) Expectations and outcomes: decision-making in the primate brain. Journal of Comparative Physiology A-Sensory Neural & Behavioral Physiology. 191(3):201-11, 2005 Mar.
McCoy AN. Crowley JC. Haghighian G. Dean HL. Platt ML. (2003) Saccade reward signals in posterior cingulate cortex. Neuron. 40(5):1031-40, 2003 Dec 4.

Mettu NB, Stanley TB, Dwyer MA, Jansen MS, Allen JE, Hall JM and McDonnell DP. The nuclear receptor-coactivator interaction surface as a target for peptide antagonists of the peroxisome proliferator-activated receptors. Mol Endocrinol 21: 2361-2377, 2007.
Armbruster BN, Linardic CM, Velman T, Bansal NP, Downie DL, Counter CM. Rescue of an hTERT mutant defective in telomere elongation by fusion with hPot1. Mol Cell Biol. 8:3552-61, 2004 Apr 24.
Jones PB, Parrish NM, Houston TA, Stapn A, Bansal NP, Dick JD, Townsend CA. A new class of antituberculosis agents. J Med Chem. 43(17):3304-14, 2000 Aug 24.
Zhu X, Bansal NP and Evans JP. Identification Key Functional Amino Acids of the Mouse Fertilin (ADAM2) Disintegrin Loop for Cell-Cell Adhesion during Fertilization. J Biol Chem. 275(11):7677-83, 2000 Mar 17.

Dong M, How T, Kirkbride KC, Gordon KJ, Lee JD, Hempel N, Kelly P, Moeller BJ, Marks JR and Blobe GC. The type III TGF-beta receptor suppresses breast cancer progression. J Clin Invest 117: 206-217, 2007.

Chi SL, Wahl ML, Mowery YM, Shan S, Mukhopadhyay S, Hilderbrand SC, Kenan DJ, Lipes BD, Johnson CE, Marusich MF, Capaldi RA, Dewhirst MW and Pizzo SV. Angiostatin-like activity of a monoclonal antibody to the catalytic subunit of F1F0 ATP synthase. Cancer Res 67: 4716-4724, 2007.

Onyewu C, Eads E, Schell WA, Perfect JR, Ullmann Y, Kaufman G, Horwitz BA, Berdicevsky I and Heitman J. Targeting the calcineurin pathway enhances ergosterol biosynthesis inhibitors against Trichophyton mentagrophytes in vitro and in a human skin infection model. Antimicrob Agents Chemother 51: 3743-3746, 2007.
Onyewu, C. and J. Heitman. 2007. Unique applications of novel antifungal drug combinations. Anti-infective Agents in Medicinal Chemistry 6:3-15.
Onyewu, C., N. A. Afshari, and J. Heitman. 2006. Calcineurin promotes infection of the cornea by Candida albicans and can be targeted to enhance fluconazole therapy. Antimicrobial Agents & Chemotherapy 50:3963-3965.
Onyewu C., F. L. Wormley Jr, J.R. Perfect, and J. Heitman. 2004.The calcineurin target, Crz1, functions in azole tolerance but is not required for virulence of Candida albicans. Infection and Immunity 72:7330-7333.
Steinbach, W. J., W. A. Schell, J. R. Blankenship, C. Onyewu, J. Heitman, and J. R. Perfect. 2004. In vitro interactions between antifungals and immunosuppressants against Aspergillus fumigatus. Antimicrobial Agents and Chemotherapy 48:1664-1669.
Onyewu, C., J. R. Blankenship, M. Del Poeta, and J. Heitman. 2003. Ergosterol Biosynthesis Inhibitors become fungicidal when combined with calcineurin inhibitors in Candida albicans, Candida glabrata, and Candida krusei. Antimicrobial Agents and Chemotherapy 47:956-964.

Palmeri ML, Trahey GE, Nightingale KR. On the Balance of Energy in Soft Tissue During Diagnostic and Therapeutic Ultrasound. in preparation.
Palmeri ML,Oldenburg KG,Nightingale KR. Ultrasonic Tracking of Structures with Low SNR. In preparation.
Palmeri ML, Wang MH, Dahl JJ, Frinkley KD and Nightingale KR. Quantifying Hepatic Shear Modulus in Vivo Using Acoustic Radiation Force. Ultrasound Med Biol, 2008.
Zhai L, Palmeri ML, Bouchard R, Nightingale RW, Nightingale KR. An integrated Indenter-ARFI imaging system for tissue stiffness quantication. in preparation.
Fahey BJ, Palmeri ML, Trahey GE. The Impact of Physiological Motion on Radiation Force Elasticity Imaging Methods. UMB, in press.
Fahey BJ, Palmeri ML, TraheyGE. Frame Rate Considerations for Real-Time Abdominal Acoustic Radiation Force Impulse Imaging. Ultrasonic Imaging, 28:193-210, 2006.
Dahl JJ, Pinton GF, Palmeri ML, AgrawalV, NightingaleKR, TraheyGE. A Parallel Tracking Method for Acoustic Radiation Force Impulse Imaging. IEEEUFFC, 54(2):301-312, 2006.
Palmeri ML, McAleavey SA, Trahey GE, Nightingale KR. Ultrasonic Tracking of Acoustic Radiation Force-Induced Displacements in Homogeneous Media. IEEEUFFC, 53(7):1300-1313, 2006.
Palmeri ML, McAleavey SA, Fong KL, Trahey GE, Nightingale KR. Dynamic Mechanical Response of Elastic Spherical Inclusions to Excitation by Impulsive Acoustic Radiation Force. IEEEUFFC, 53(11):2065-2079, 2006.
Palmeri ML, Frinkley KD, Oldenburg KG, Trahey GE, Nightingale KR. Characterizing Acoustic Attenuation of Homogeneous Media Using Focused Impulsive Acoustic Radiation Force. Ultrasonic Imaging, 28: 114-128, 2006.
Nightingale KR, Palmeri ML, Trahey GE. Analysis of Factors Affecting Image Quality in Radiation Force Generated Images. UMB, 32(1):61-72, 2006.
Palmeri ML, Frinkley KD, Zhai L, Bentley RC, Ludwig K, Gottfried M, Nightingale KR. Acoustic Radiation Force Impulse Imaging of the Gastrointestinal Tract. UltrasonicImaging, 27:75-88, 2005.
Palmeri ML, Sharma AC, Bouchard RR, Nightingale RW, Nightingale KR. AFinite-Element Method Model of Soft Tissue Response to Impulsive Acoustic Radiation Force. IEEEUFFC, 52(10):1699-1712, 2005.
Fahey BJ, Nightingale KR, Nelson RC, Palmeri ML, Trahey GE. Acoustic Radiation Force Impulse Imaging of the Abdomen: Demonstration of Feasibility and Utility UMB, 31(9):1185-1198, 2005.
Fahey BJ, Nightingale KR, Palmeri ML, McAleavey SA, Wolf P, Trahey GE. Acoustic radiation forceimpulse imaging of myocardial radiofrequency ablation: initial in vivo results. IEEEUFFC, 52(4):631-641, 2005.
Trahey GE, Palmeri ML, Bentley RC, Nightingale KR. Acoustic Radiation Force Impulse Imaging of the Mechanical Properties of Arteries: In vivo and Ex vivo Results. UMB, 30(9):1163-1171, 2004.
Gentry KL, Palmeri ML, Sachedina N, Smith SW. Finite Element Analysis of Temperature Rise and Lesion Formation from Catheter Ultrasound Ablation Transducers. IEEEUFFC, 52(10):1713-1721, 2005.
Palmeri ML, Frinkley KD, Nightingale KR. Experimental Studies of the Thermal Effects Associated with Radiation Force Imaging of Soft Tissue Ultrasonic Imaging, 26:100-114, 2004.
Palmeri ML, Nightingale KR. On the thermal effects associated with acoustic radiation force impulse imaging. IEEEUFFC, 51(5):551-565, 2004.
Nightingale KR, Palmeri ML, Nightingale RW, Trahey GE. On the feasibility of remote palpation using acoustic radiation force. JASA, 110(1):625-634, 2001.
Nightingale KR, Nightingale RW, Palmeri ML,Trahey GE. A finite element model of remote palpation of breast lesions using ultrasonic acoustic radiation force: factors affecting tissue displacement. Ultrasonic Imaging, 22(1):35-54, 2000.

Petersen T and Niklason L. Cellular lifespan and regenerative medicine. Biomaterials 28: 3751-3756, 2007.
Lemaire A, Nikolic I, Petersen T, Burfeind W. "Seven Year Single Center Experience with Cervical Mediastinoscopy: Complications & False Negative Rate", Society of Thoracic Surgeons 42nd Annual meeting, 2006.
Wilbrecht L, Petersen T, Nottebohm F. "Bilateral LMAN lesions cancel differences in HVC neuronal recruitment induced by unilateral syringeal denervation", Journal of Compartive Physiology A, 188, 909-915 (2002).
Pu Y, Rafailovich MH, Sokolov J, Gersappe D, Petersen T, Wu WL and Schwarz SA. "Mobility of Polymer Chains Confined at a Free Surface", Physical Review Letters, Vol. 87, No. 20 (2001).

Needham, D. and Ponce, A.M.. (2006). Nanoscale drug delivery vehicles for solid tumors: a new paradigm for localized drug delivery using temperature sensitive liposomes. In M.M. Amiji(Ed.), Nanotechnology for Cancer Therapeutics. (pp.675-719). Boca Raton, FL: Taylor & Francis/CRC Press.
Vlahovic G, Ponce AM, Rabbani Z, Salahuddin FK, Zgonjanin L, Spasojevic I, Vujaskovic Z and Dewhirst MW. Treatment with imatinib improves drug delivery and efficacy in NSCLC xenografts. Br J Cancer 97: 735-740, 2007.
Ponce AM, Viglianti BL, Yu D, Yarmolenko PS, Michelich CR, Woo J, Bally MB and Dewhirst MW. Magnetic resonance imaging of temperature-sensitive liposome release: drug dose painting and antitumor effects. J Natl Cancer Inst 99: 53-63, 2007.
Ponce AM, Vujaskovic Z, Yuan F, Needham D and Dewhirst MW. Hyperthermia mediated liposomal drug delivery. Int J Hyperthermia 22: 205-213, 2006.
Viglianti BL, Ponce AM, Michelich CR, Yu D, Abraham SA, Sanders L, Yarmolenko PS, Schroeder T, MacFall JR, Barboriak DP, Colvin OM, Bally MB and Dewhirst MW. Chemodosimetry of in vivo tumor liposomal drug concentration using MRI. Magn Reson Med 56: 1011-1018, 2006.
Ponce AM, Wright A, Dewhirst MW and Needham D. Targeted biolavailability of drugs through triggered release of liposomes. Future Lipidology 1(1):25-34, Feb 2006.
Anderson CR, Ponce AM and Price RJ. Absense of OX-43 antigen expression in invasive capillary sprouts: identification of a capillary sprout-specific endothelial phenotype. American Journal of Physiology - Heart & Circulator Physiology 286: H346-53, 2004.
Ponce AM and Price RJ. Angiogenic stimulus determines the positioning of pericytes within capillary sprouts in vivo. Microvascular Research 65, 2003.
Zeller PJ, Skalak TC, Ponce AM and Price RJ. In vivo chemotactic properties and spatial expression of PDGF in developing mesenteric microvascular networks. American Journal of Physiology - Heart & Cirulatory Physiology 280:2116-2125, 2001.

Pua, HH and YW He. Autophagy regulation of T lymphocyte homeostasis. Current Topics in Microbiology and Immunology. In Press. 2009.
Pua, HH, J Guo, M Komatsu and YW He. Autophagy is essential for maintaining mitochondrial clearance in mature T lymphocytes. J Immunol 182: 4046-55, 2009.
Pua, HH and YW He. Autophagy regulation of T lymphocyte homeostasis. Current Topics in Microbiology and Immunology. In Press. 2009.
Pua, HH, J Guo, M Komatsu and YW He. Autophagy is essential for maintaining mitochondrial clearance in mature T lymphocytes. J Immunol 182: 4046-55, 2009.
Miller BC, Zhao Z, Stephenson LM, Cadwell K, Pua HH, Lee HK, Mizushima NN, Iwasaki A, He YW, Swat W and Virgin HW. The autophagy gene ATG5 plays an essential role in B lymphocyte development. Autophagy 4, 2007.
Pua HH, Dzhagalov I, Chuck M, Mizushima N and He YW. A critical role for the autophagy gene Atg5 in T cell survival and proliferation. J Exp Med 204: 25-31, 2007.
Pua HH and He YW. Maintaining T lymphocyte homeostasis: another duty of autophagy. Autophagy 3: 266-267, 2007.
Zhang, N, H Hartig, I Dzhagalov, D Draper, and YW He. The role of apoptosis in the development and function of T lymphocytes. Cell Res 15:749-769, 2005.

Submitted: Quinones QJ, Wahl ML,Youngs K., Fields TA, Pizzo SV. Metabolic Targeting of Prostate Cancer Cells via the H+-linked Monocarboxylate Transporter 1 (MCT1/SLC16A1). Molecular Pharmacology.
Submitted: Spatial Correlation of Glycopenia and Glycogen Accumulation to Hypoxia in Human Head and Neck Cancer. Schroeder T, Geradts J, Dreher M, Brizel D, Kennedy K, Quinones QJ, Palmer G, Rabbani ZN, Rubio MA, Scher R, Viglianti B, Lan L, Mueller-Klieser W, Walenta S, Reichert T, Pizzo SV, Dewhirst MW. Cancer Research.
Quinones QJ, GG de Ridder, and SV Pizzo, GRP78: a chaperone with diverse roles beyond the endoplasmic reticulum. Histol Histopathol, 2008. 23(11): p. 1409-16.
Fang J, Quinones QJ, Holman TL, Morowitz MJ, Wang Q, Zhao H, Sivo F, Maris JM, Wahl M L.(2006). "The H+-linked monocarboxylate transporter (MCT1/SLC16A1): a potential therapeutic target for high-risk neuroblastoma." Mol Pharmacol 70(6): 2108-15.

Ream M, Frush D. Dancing eyes and dancing feet, a clinical review of neuroblastoma and associated opsoclonus-myoclonus syndrome for radiologists. In preparation.
Ream MA, Chandra R, Peavey M, Ray AM, Roffler-Tarlov S, Kim HG, Wetsel WC, Rockman HA and Chikaraishi DM. High oxygen prevents fetal lethality due to lack of catecholamines. Am J Physiol Regul Integr Comp Physiol 295: R942-953, 2008.
Ream M, Ray AM, Chandra R and Chikaraishi DM. Early fetal hypoxia leads to growth restriction and myocardial thinning. Am J Physiol Regul Integr Comp Physiol 295: R583-595, 2008.
Chandra R, Portbury AL, Ray A, Ream M, Groelle M, Chikaraishi DM. Beta1-adrenergic receptors maintain fetal heart rate and survival. Biology of the Neonate, 89: 147-158, 2006.

Reedy, JL, Floyd, A M, and Heitman J. Mechanistic plasticity of mating and meiosis in the Candida pathogenic species complex. Current Biol. Accepted. 2009
Butler, G, Rasmussen, MD, Lin, MF, Santos, MAS, Sakthikumar, S, Munro, CA, Rheinbay, E, Grabherr, M, Forche, A, Reedy, JL, et al. Evolution of pathogenicity and virulence in eight Candida genomes. Nature Accepted. 2009
Idnurm, A, Walton, FJ, Floyd, A, Reedy, JL, and Heitman, J Identification of ENA1 as a virulence gene of the human pathogenic fungus Cryptococcus neoformans through signature-tagged insertional mutageneisis. Eukaryot Cell, 8(3): 315-326. 2009.
Bastidas, RJ, Reedy, JL, Morales-Johansson, H, Heitman, J, and Cardenas, ME. Signalling cascades as drug targets in model and pathogenic fungi. Curr Opin Inverstig Drugs, 9(8): 856-864. 2008.
Reedy JL, Bastidas RJ and Heitman J. The virulence of human pathogenic fungi: notes from the South of France. Cell Host Microbe 2: 77-83, 2007.
Steinbach WJ, Reedy JL, Cramer RA, Jr., Perfect JR and Heitman J. Harnessing calcineurin as a novel anti-infective agent against invasive fungal infections. Nat Rev Microbiol 5: 418-430, 2007.
Reedy JL, Husain S, Ison M, Pruett TL, Singh N and Heitman J. Immunotherapy with tacrolimus (FK506) does not select for resistance to calcineurin inhibitors in Candida albicans isolates from liver transplant patients. Antimicrob Agents Chemother 50: 1573-1577, 2006.
Idnurm A, Reedy JL, Nussbaum JC and Heitman J. Cryptococcus neoformans virulence gene discovery through insertional mutagenesis. Eukaryot Cell 3: 420-429, 2004.

Pearson JL, Robinson TJ, Munoz MJ, Kornblihtt AR and Garcia-Blanco MA. Identification of the cellular targets of the transcription factor TCERG1 reveals a prevalent role in mRNA processing. J Biol Chem, 2008.

Jen-Tsan Ashley Chi, Carolyn Sangokoya, and Carlos M. de Castro MicroRNA Expression in Red Blood Cells from Patients with PNH. Blood (ASH Annual Meeting Abstracts) 110: 3675.

Hyatt SM, Lockamy EL, Stein RA, McDonnell DP, Miller AB, Orband-Miller LA, Willson TM and Zuercher WJ. On the intractability of estrogen-related receptor alpha as a target for activation by small molecules. J Med Chem 50: 6722-6724, 2007.
Stein RA and McDonnell DP. Estrogen-related receptor alpha as a therapeutic target in cancer. Endocr Relat Cancer 13 Suppl 1: S25-32, 2006.

Kerry S, TeKippe M, Gaddis NC and Aballay A. GATA transcription factor required for immunity to bacterial and fungal pathogens. PLoS ONE 1: e77, 2006.

Bidoia C, Misgeld T, Weinzierl E, Buffelli M, Feng G, Cangiano A, Lichtman JW and Sanes JR. Comment on "Reelin promotes peripheral synapse elimination and maturation". Science 303: 1977; author reply 1977, 2004.

Julius M. Wilder, Sherman A. James, Angela O’Rand. Low Education and Premature Mortality in a Southern African American Cohort: The Pitt County Study. (In edit).

 

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